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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015794434.1_cds_XP_016438697.1_3342
CDS Infomation

[gene=LOC107764609] [db_xref=GeneID:107764609] [protein=ribosomal RNA small subunit methyltransferase B-like] [protein_id=XP_016438697.1] [location=join(94336..94457,96284..96428,96835..96925,98003..98212,98338..98576,98815..98946,100121..100188,100286..100347,100781..100914)] [gbkey=CDS]
Sequence

ATGATGGATGTGGAAGAAACTTCAACTTTACCTTTGCCAGATGCTTTTCTTGATTTTCTG
AAACAGAATGGCTTGGATCCTTCTATTTATACTGCCACTGATTCTACACCTCGTTATATA
AGGTTAAAGCCCGGTTATGAGGATTTCCTTGAAGAAATTGAAACTGATATTAGATGCAAG
CTTGAAAGAGTTTGTTGGTTGCCAAATTTCTATTATCTTCCACCTGATGTTCGAATTGCT
AGTTCGAAGGCATACCAAGAAGGGAAGATATATGGAATTGATGCGGCATCCGGAGCTGCT
GTGACAGCTTTGGACATTTCAGTTGGGGATCATGTCCTTGATCTTTGTGCTGCACCTGGT
GCTAAACTTTGTATGATATTGGACATTCTTGGCAGTTCGGGCTCTGTGACCGGTGTTGAC
ATTGCAAAACATCGTTTAGCGGCCTGTAGAACCATGCTACAGAAATATGGTCTTGGTGAC
CATTGTCGTCTTTTTGTTGCTGATGGTACCAGTTTTTCCCTTCTTCCTGTCAGAGTCCGT
TCAGACTCTCCGTTGCAAAGTGAAAATGATGAATTTCCTTCCGGAGAAAATTCTGAAGTA
TATAGGGAGTGGAAGTCTCGCAGACCATGGAAAGAAAGGAAGAAGGAAGCTACAGCGAGA
GAAAAAAGTGTCTCCAAGCTATTCTCACCAACTCAAGAACCAGAGCTTATATTTTATGGT
CGGTATTCTGGGGTGGTTGGACTGACAAAGAATGAATTATATAAAAAAATGCCTATGACT
GAGGTTTTGCAGCTCGGTTATGATAAGGTTCTTGTGGATGCAGAATGTACCCATGATGGT
TCTATTAAGCACGTTCAGAAATTTGAACAATGGGGCTGGACAACCCTCCAGCGGCGCGTG
CTAGATGCAGAAAGAACCGATGATCTGACTATCCTTCAGCTGCAACTTCTGATTAATGGA
TTCAGATTGCTCAGAGTAGGGGGAGTCCTTGTCTATAGCACTTGCAGTTTAACCTTTGCT
CAGAATGAAGATGTGGTCGAGCGATTCCTTTCAGAGAACACATCTGCAGAATTGCTAGAG
ATTACTGCTGCCAAAAATTGGCCATGCAAGAGTGGTCGCATACAGAAAACCTTACGGTTT
GATCCATTGACATCTAGTACAAGCGGACTTTTTGTTGCTAAGTTCACAAAATTGGCCATT
TAG

Peptide Sequence

PEP ID

XP_016438697.1
PEP Infomation

PREDICTED: ribosomal RNA small subunit methyltransferase B-like [Nicotiana tabacum]
Sequence

MMDVEETSTLPLPDAFLDFLKQNGLDPSIYTATDSTPRYIRLKPGYEDFLEEIETDIRCK
LERVCWLPNFYYLPPDVRIASSKAYQEGKIYGIDAASGAAVTALDISVGDHVLDLCAAPG
AKLCMILDILGSSGSVTGVDIAKHRLAACRTMLQKYGLGDHCRLFVADGTSFSLLPVRVR
SDSPLQSENDEFPSGENSEVYREWKSRRPWKERKKEATAREKSVSKLFSPTQEPELIFYG
RYSGVVGLTKNELYKKMPMTEVLQLGYDKVLVDAECTHDGSIKHVQKFEQWGWTTLQRRV
LDAERTDDLTILQLQLLINGFRLLRVGGVLVYSTCSLTFAQNEDVVERFLSENTSAELLE
ITAAKNWPCKSGRIQKTLRFDPLTSSTSGLFVAKFTKLAI

Transcript Sequence

Gene sequence data has not been registered.